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Hall of Fame

Please contribute your own work flows in your favourite colours with (an optional) short description to email: ruffus_lib at llew.org.uk

RNASeq pipeline

http://en.wikipedia.org/wiki/RNA-Seq

Mapping transcripts onto genomes using high-throughput sequencing technologies (svg).

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non-coding evolutionary constraints

http://en.wikipedia.org/wiki/Noncoding_DNA

Non-protein coding evolutionary constraints in different species (svg).

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SNP annotation

Predicting impact of different Single Nucleotide Polymorphisms

http://en.wikipedia.org/wiki/Single-nucleotide_polymorphism

Population variation across genomes (svg).

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Using “pseudo” targets to run only part of the pipeline (svg).

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Chip-Seq analysis

Analysing DNA binding sites with Chip-Seq http://en.wikipedia.org/wiki/Chip-Sequencing