org.jmol.shapecgo.CGO

public class CGO extends MeshCollection

PyMOL Compiled Graphic Object (CGO) meshes

Field Summary

Fields inherited from class MeshCollection
bsDisplay, colix, color, connections, currentMesh, displayWithinDistance2, displayWithinPoints, explicitID, htObjects, isDisplayWithinNot, isFixed, jvxlData, linkedMesh, meshCount, meshes, modelIndex, nUnnamed, pickedMesh, pickedModel, pickedPt, pickedVertex, PREVIOUS_MESH_ID, previousMeshID, title

Fields inherited from class Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr
Constructor Summary

Constructors

Constructor

Description

CGO()
Method Summary

Modifier and Type

Method

Description

void

allocMesh(String thisID, Mesh m)

protected void

clean()

protected void

deleteModels(int modelIndex)

Object

getProperty(String property, int index)

boolean

getPropertyData(String property, Object[] data)

Object

getShapeDetail()

String

getShapeState()

void

setModelVisibilityFlags(BS bsModels)

void

setProperty(String propertyName, Object value, BS bs)

Methods inherited from class MeshCollection
checkExplicit, deleteMeshI, deleteMeshKey, getIndexFromName, getMesh, getMeshList, getPickedPoint, getPropDataMC, getPropMC, getValues, getVertices, initShape, merge, resetObjects, setMeshColor, setPropMC, setStatusPicked, setTitle, setTokenProperty

Methods inherited from class Shape
appendCmd, checkBoundsMinMax, checkObjectClicked, checkObjectDragged, checkObjectHovered, coordinateInRange, encodeColor, findNearestAtomIndex, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getPropShape, getSize, getSizeG, getTranslucentLabel, initializeShape, initModelSet, replaceGroup, setAtomClickability, setModelSet, setProperties, setPropS, setShapeSizeRD, setSize, setSizeRD, wasClicked

Methods inherited from class Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- CGO
  
  public CGO()
Method Details
- allocMesh
  
  public void allocMesh(String thisID, Mesh m)
  
  Overrides:
  
  allocMesh in class MeshCollection
- setProperty
  
  public void setProperty(String propertyName, Object value, BS bs)
  
  Specified by:
  
  setProperty in class Shape
- deleteModels
  
  protected void deleteModels(int modelIndex)
- getProperty
  
  public Object getProperty(String property, int index)
  
  Overrides:
  
  getProperty in class Shape
  
  Parameters:
  
  property -
  
  index -
  
  Returns:
  
  true if serviced
- getPropertyData
  
  public boolean getPropertyData(String property, Object[] data)
  
  Overrides:
  
  getPropertyData in class Shape
  
  Parameters:
  
  property -
  
  data -
  
  Returns:
  
  true if serviced
- clean
  
  protected void clean()
  
  Overrides:
  
  clean in class MeshCollection
- getShapeDetail
  
  public Object getShapeDetail()
  
  Overrides:
  
  getShapeDetail in class Shape
- getShapeState
  
  public String getShapeState()
  
  Specified by:
  
  getShapeState in class Shape
- setModelVisibilityFlags
  
  public void setModelVisibilityFlags(BS bsModels)
  
  Overrides:
  
  setModelVisibilityFlags in class MeshCollection
  
  Parameters:
  
  bsModels -

Class CGO

Field Summary

Fields inherited from class MeshCollection

Fields inherited from class Shape

Constructor Summary

Method Summary

Methods inherited from class MeshCollection

Methods inherited from class Shape

Methods inherited from class Object

Constructor Details

CGO

Method Details

allocMesh

setProperty

deleteModels

getProperty

getPropertyData

clean

getShapeDetail

getShapeState

setModelVisibilityFlags