Backbone (Jmol 16.3.55 API)

java.lang.Object

org.jmol.shape.Shape

org.jmol.shapebio.BioShapeCollection

org.jmol.shapebio.Backbone

public class Backbone extends BioShapeCollection

Field Summary

Fields inherited from class BioShapeCollection
bioShapes

Fields inherited from class Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr
Constructor Summary

Constructors

Constructor

Description

Backbone()
Method Summary

Modifier and Type

Method

Description

void

addDisplayedBackbone(Atom a, boolean isVisible)

void

initShape()

void

setAtomClickability()

void

setProperty(String propertyName, Object value, BS bsSelected)

void

setShapeSizeRD(int size, RadiusData rd, BS bsSelected)

Methods inherited from class BioShapeCollection
findNearestAtomIndex, getBioShape, getShapeState, getSizeG, initModelSet, replaceGroup, setModelVisibilityFlags, setPropBSC

Methods inherited from class Shape
appendCmd, checkBoundsMinMax, checkObjectClicked, checkObjectDragged, checkObjectHovered, coordinateInRange, encodeColor, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getIndexFromName, getProperty, getPropertyData, getPropShape, getShapeDetail, getSize, getTranslucentLabel, initializeShape, setModelSet, setProperties, setPropS, setSize, setSizeRD, wasClicked

Methods inherited from class Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- Backbone
  
  public Backbone()
Method Details
- initShape
  
  public void initShape()
  
  Overrides:
  
  initShape in class BioShapeCollection
- setProperty
  
  public void setProperty(String propertyName, Object value, BS bsSelected)
  
  Overrides:
  
  setProperty in class BioShapeCollection
- setShapeSizeRD
  
  public void setShapeSizeRD(int size, RadiusData rd, BS bsSelected)
  
  Overrides:
  
  setShapeSizeRD in class BioShapeCollection
- addDisplayedBackbone
  
  public void addDisplayedBackbone(Atom a, boolean isVisible)
- setAtomClickability
  
  public void setAtomClickability()
  
  Overrides:
  
  setAtomClickability in class BioShapeCollection